Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886990.1_cds_XP_016441239.1_36621
CDS Infomation

[gene=LOC107766870] [db_xref=GeneID:107766870] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016441239.1] [location=complement(join(26855..27343,27443..28420))] [gbkey=CDS]
Sequence

ATGTTTTCTCTTTCAAAAATGCCTTCAACAACATCAGTGCTATCAGCATATACTACTTTG
ACTGCTTCAGCAGTTCTAGTTAGAACTTTAGTCTCTGAAGTTCAGAACATGACAAACCAA
CTCTTACCCAAAAATCTCCAAGAGAAAATCTTGTCAAAAGTTGGAATCTTAATGGGAAAT
CTCTCTTCCCAAATGACACTCATCATTGAGGAAAACACTGGTTTCACTCCAAATGAAGTC
TTTGAAGCTTCTAACATATACTTAGGCACTATAGTGTACCCTTCAGTTCAAAGGGTCAAA
ATTTCCAAGGCAGAGAAAGAAAAGAAGTTCTCAGTCACCATAAGCAAAGATGAGAAAATC
ATTGACACATTTGAAGGAGTGGAACTCATTTGGGAGCTAAAAATTGTGGAAACTCACAAG
GCTAATTGTGATGATGGCTACTTCTCTTCAGAAAAAGTGGAACAAAAATGGTTTGAACTT
AGTTTCCTCAAGAATCACAAGGAAATGGTGTTGGACACTTATTTGCCATTTGTTCTTGAA
AAATCAAAAGCCATAAAAGAAGAAAACAAGGTGATAACACTCTCCCCACTTGGAAGTTAT
GGTGAAAGTGTCAATCTTCATCATCCATCAACTTTTGATACACTAGCAATGGATCCTGAA
CTCAAGCAAAAACTGATGGATGATTTAAACAGATTTGTTATGAGAAAAGATTATTATAGA
AGAGTTGGCAAGGCCTGGAAAAGAGGATATTTGTTGTATGGACCTCCAGGGACAGGCAAA
TCTAGCTTGATTGCAGCCATTGCTAATTATCTGAAATTTGATATATATGATATGGAACTC
TCTAGCTTGCAAGCCAACTCCGATTTCAGAAGACTGCTAGTCTCTGCCAAGAATAGATCC
ATTCTTGTCATTGAGGACATTGATTGCACCATTGAGTTAGAGAACAGAGATGGTGGCGCG
CACCAAAGTGAAAGTCAGGTTACACTTTCAGGGTTGCTGAACTTCATTGATGGGCTATGG
TCAAGTTGTGGAGATGAAAGAATAATTGTGTTCACAACTAACTATAAAGAAAGACTAGAC
CCTGCATTATTAAGGCCAGGAAGAATGGACATGCACATTGAAATGTCCTATTGCACTCCT
AGCGGATTCAAGATTCTAGCTTCCAACTACCTTGGCCTAAAAAATCACTGCAAGTTTCGC
GAAATCGAAGAGCTTATAACTGAACTGAATGTGACCGCAGCAGAGATTGCACAAGAGCTA
ATGATAAGTGATGAAGCAGACATTGCACTTGATGGACTAATTAAATTCCTTAACAAGAAA
AAAGAGGAGAAAATTGTGGTACAAAATGCACTTGATGAGAAAGAAGATGAAATTGAGGAA
ATAAACAAGCAAGTAGAAACCAAAGAGATTAAGAAACGTAAGGGGAATTCAAGGAGGGGA
GGAAGAACCAGGCGCAAAATTTTCTAG

Peptide Sequence

PEP ID

XP_016441239.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MFSLSKMPSTTSVLSAYTTLTASAVLVRTLVSEVQNMTNQLLPKNLQEKILSKVGILMGN
LSSQMTLIIEENTGFTPNEVFEASNIYLGTIVYPSVQRVKISKAEKEKKFSVTISKDEKI
IDTFEGVELIWELKIVETHKANCDDGYFSSEKVEQKWFELSFLKNHKEMVLDTYLPFVLE
KSKAIKEENKVITLSPLGSYGESVNLHHPSTFDTLAMDPELKQKLMDDLNRFVMRKDYYR
RVGKAWKRGYLLYGPPGTGKSSLIAAIANYLKFDIYDMELSSLQANSDFRRLLVSAKNRS
ILVIEDIDCTIELENRDGGAHQSESQVTLSGLLNFIDGLWSSCGDERIIVFTTNYKERLD
PALLRPGRMDMHIEMSYCTPSGFKILASNYLGLKNHCKFREIEELITELNVTAAEIAQEL
MISDEADIALDGLIKFLNKKKEEKIVVQNALDEKEDEIEEINKQVETKEIKKRKGNSRRG
GRTRRKIF

Transcript Sequence

Gene sequence data has not been registered.